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  5. GSVIVT01032807001

GSVIVT01032807001 (SZF2, ATSZF2, ZFAR1, CZF1)


Aliases : SZF2, ATSZF2, ZFAR1, CZF1

Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032807001
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AT2G40140 SZF2, ATSZF2, ZFAR1, CZF1 zinc finger (CCCH-type) family protein 0.1 OrthoFinder output from all 47 species
AT3G55980 ATSZF1, SZF1 salt-inducible zinc finger 1 0.1 OrthoFinder output from all 47 species
Adi_g008195 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Adi_g033634 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Adi_g049127 No alias regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Adi_g049591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075797 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Adi_g081004 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Aev_g05467 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ala_g05322 No alias regulatory factor *(TZF) of mRNA stress granule... 0.07 OrthoFinder output from all 47 species
Als_g01096 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Als_g47721 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Aob_g06734 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Aob_g07949 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Aob_g19226 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aop_g14168 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Aop_g21643 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aop_g32930 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Aspi01Gene04702.t1 Aspi01Gene04702 regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Aspi01Gene30050.t1 Aspi01Gene30050 regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Azfi_s0524.g075292 ATSZF1, SZF1 regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cba_g03345 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Cba_g05838 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cba_g23011 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Cba_g33760 No alias regulatory factor *(TZF) of mRNA stress granule... 0.01 OrthoFinder output from all 47 species
Ceric.04G078500.1 Ceric.04G078500 regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Ceric.05G100900.1 Ceric.05G100900 regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ceric.23G017000.1 Ceric.23G017000 regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Ceric.24G053600.1 Ceric.24G053600 regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Cre03.g146267 ATTZF1, ATCTH RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
Dac_g10045 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Dac_g21830 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Dac_g22345 No alias regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Dcu_g03161 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dcu_g16518 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dcu_g21498 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dcu_g38463 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dde_g03949 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Dde_g25533 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Ehy_g08338 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ehy_g08570 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
GSVIVT01025263001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.05 OrthoFinder output from all 47 species
LOC_Os03g49170.1 LOC_Os03g49170 mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g03760.1 LOC_Os05g03760 mRNA-binding regulatory factor (TZF) 0.14 OrthoFinder output from all 47 species
LOC_Os07g38090.2 LOC_Os07g38090 mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
LOC_Os12g33090.1 LOC_Os12g33090 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Len_g18302 No alias regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Len_g55937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02270 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Lfl_g04930 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Lfl_g28211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_11306g0010 No alias mRNA-binding regulatory factor (TZF) 0.06 OrthoFinder output from all 47 species
Mp6g00540.1 No alias mRNA-binding regulatory factor (TZF) 0.04 OrthoFinder output from all 47 species
Msp_g10175 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Msp_g15903 No alias regulatory factor *(TZF) of mRNA stress granule... 0.06 OrthoFinder output from all 47 species
Nbi_g05906 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Nbi_g10809 No alias regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Ore_g10470 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ore_g15984 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ore_g25247 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ore_g29320 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ore_g30495 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ore_g35856 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ore_g41768 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pir_g00662 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pir_g39344 No alias regulatory factor *(TZF) of mRNA stress granule... 0.01 OrthoFinder output from all 47 species
Pir_g43895 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pnu_g20981 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Pnu_g24839 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Pnu_g25039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30312 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004066 No alias regulatory factor *(TZF) of mRNA stress granule... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010425 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017049 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Sam_g04991 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Sam_g15237 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Sam_g49873 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Solyc05g041720.2.1 PEI1, Solyc05g041720 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Solyc05g052570.3.1 SZF2, ATSZF2,... mRNA-binding regulatory factor (TZF) 0.16 OrthoFinder output from all 47 species
Solyc06g082010.4.1 Solyc06g082010 mRNA-binding regulatory factor (TZF) 0.06 OrthoFinder output from all 47 species
Solyc12g008660.1.1 Solyc12g008660 mRNA-binding regulatory factor (TZF) 0.01 OrthoFinder output from all 47 species
Spa_g10379 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Spa_g31285 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Spa_g41753 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Spa_g43052 No alias regulatory factor *(TZF) of mRNA stress granule... 0.07 OrthoFinder output from all 47 species
Zm00001e005347_P001 Zm00001e005347 mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
Zm00001e016582_P001 Zm00001e016582 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Zm00001e027454_P001 ATTZF1, ATCTH,... mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
Zm00001e027566_P001 Zm00001e027566 mRNA-binding regulatory factor (TZF) 0.09 OrthoFinder output from all 47 species
Zm00001e029465_P001 Zm00001e029465 mRNA-binding regulatory factor (TZF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 328 348
No external refs found!