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  5. GSVIVT01032827001

GSVIVT01032827001


Description : Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032827001
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00121770 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00058p00097500 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00111070 RPM1, RPS3,... Putative disease resistance protein At1g59780... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00207600 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00148p00037160 ZAR1,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
GSVIVT01012165001 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01024097001 No alias Probable disease resistance RPP8-like protein 2... 0.07 OrthoFinder output from all 47 species
GSVIVT01024102001 RPP13 Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01026820001 No alias Putative disease resistance RPP13-like protein 3... 0.07 OrthoFinder output from all 47 species
GSVIVT01026910001 No alias Inactive disease susceptibility protein LOV1... 0.04 OrthoFinder output from all 47 species
GSVIVT01032824001 No alias Putative disease resistance protein At1g50180... 0.09 OrthoFinder output from all 47 species
GSVIVT01032825001 No alias Putative disease resistance protein At1g50180... 0.05 OrthoFinder output from all 47 species
Gb_25815 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.04 OrthoFinder output from all 47 species
LOC_Os01g23380.1 RPP13, LOC_Os01g23380 no description available(sp|p0do08|pikm2_orysj : 348.0) 0.05 OrthoFinder output from all 47 species
LOC_Os04g21890.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os04g46300.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os08g28570.1 LOC_Os08g28570 no description available(sp|q2r8l1|rga5s_orysj : 394.0) 0.03 OrthoFinder output from all 47 species
LOC_Os09g09490.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os10g03570.1 LOC_Os10g03570 no description available(sp|q2r8l1|rga5s_orysj : 283.0) 0.03 OrthoFinder output from all 47 species
LOC_Os11g11900.1 LOC_Os11g11900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g12300.1 LOC_Os11g12300 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os12g37760.1 LOC_Os12g37760 no description available(sp|p0do08|pikm2_orysj : 370.0) 0.05 OrthoFinder output from all 47 species
LOC_Os12g37770.1 LOC_Os12g37770 no description available(sp|f7j0n2|rga5r_orysj : 437.0) 0.05 OrthoFinder output from all 47 species
Solyc03g005650.1.1 Solyc03g005650 Probable disease resistance protein At1g58390... 0.03 OrthoFinder output from all 47 species
Zm00001e020947_P001 Zm00001e020947 Putative disease resistance protein RGA4 OS=Solanum... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 148 397
No external refs found!