GSVIVT01033142001 (GLR2.8, ATGLR2.8)

Aliases : GLR2.8, ATGLR2.8

Description : Solute transport.channels.GLR ligand-gated cation channel

Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01033142001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00140120	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00180760	GLR2.3,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00182630	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00186040	GLR2.2,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00055p00227100	GLR2.2,...	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
AMTR_s00062p00050250	GLUR3, GLR3.4,...	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
AMTR_s00062p00055860	GLR3.3,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.09	OrthoFinder output from all 47 species
AT3G04110	ATGLR1.1, GLR1.1, GLR1	glutamate receptor 1.1	0.03	OrthoFinder output from all 47 species
AT3G07520	GLR1.4, ATGLR1.4	glutamate receptor 1.4	0.05	OrthoFinder output from all 47 species
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.03	OrthoFinder output from all 47 species
Aev_g20544	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g41610	GLR3.3, ATGLR3.3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g04471	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g14918	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g33382	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g38137	ATGLR3.2,...	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g68675	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene49380.t1	ATGLR3.5, GLR6,...	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g06484	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g68265	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.03G069800.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.02	OrthoFinder output from all 47 species
Ceric.22G076100.1	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.04	OrthoFinder output from all 47 species
Ceric.23G025600.1	GLR3.3,...	ligand-gated cation channel *(GLR) & original...	0.02	OrthoFinder output from all 47 species
Ceric.35G032300.1	GLR3.3,...	ligand-gated cation channel *(GLR) & original...	0.02	OrthoFinder output from all 47 species
Dac_g46260	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g38984	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01014244001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
GSVIVT01021159001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.06	OrthoFinder output from all 47 species
GSVIVT01022297001	GLR3.6, ATGLR3.6	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
GSVIVT01029195001	GLR2.2, ATGLR2.2	Solute transport.channels.GLR ligand-gated cation channel	0.1	OrthoFinder output from all 47 species
GSVIVT01033137001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.05	OrthoFinder output from all 47 species
GSVIVT01033155001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
GSVIVT01033156001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.05	OrthoFinder output from all 47 species
Gb_08197	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
Gb_16129	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
Gb_20613	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_27767	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
Gb_28364	ATGLR3.2,...	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
Gb_39754	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
LOC_Os02g54640.1	ATGLR2.9,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os06g08890.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os06g09090.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os07g01310.1	GLUR3, GLR3.4,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
LOC_Os09g25960.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os09g26144.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Len_g10645	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.05	OrthoFinder output from all 47 species
Len_g36345	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g39997	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g45939	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g46456	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g55769	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g08800	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g15365	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g33545	GLR3.6, ATGLR3.6	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g38023	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
MA_10427025g0010	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
MA_10428186g0010	GLR2.3, ATGLR2.3	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
MA_10428186g0020	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
MA_10432703g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.1	OrthoFinder output from all 47 species
MA_46902g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_6222576g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
Msp_g15059	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g40693	GLR2.7, ATGLR2.7	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g03876	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g32328	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g61341	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005895	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020221	ATGLR2.6, GLR2.6	ligand-gated cation channel *(GLR) & original...	0.02	OrthoFinder output from all 47 species
Solyc06g063170.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Solyc06g063180.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
Solyc06g063190.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
Solyc06g063200.2.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.12	OrthoFinder output from all 47 species
Solyc06g063210.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.07	OrthoFinder output from all 47 species
Solyc07g052400.3.1	GLUR3, GLR3.4,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Tin_g25753	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g41455	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e013023_P001	ATGLR3.5, GLR6,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Zm00001e016079_P001	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Zm00001e023728_P001	GLR2.8,...	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001828	ANF_lig-bd_rcpt	5	177
IPR001828	ANF_lig-bd_rcpt	187	300
IPR001320	Iontro_rcpt_C	708	739
IPR001638	Solute-binding_3/MltF_N	382	707

External Links

No external refs found!

GSVIVT01033142001 (GLR2.8, ATGLR2.8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation