Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIb basal transcription factor
Gene families : OG0001894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001894_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G10330 | No alias | Cyclin-like family protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g015426 | No alias | basal transcription factor *(TFIIb) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000663.43 | No alias | Transcription initiation factor IIB-2 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g01872 | No alias | basal transcription factor *(TFIIb) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g57254 | No alias | basal transcription factor *(TFIIb) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36950 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0017025 | TBP-class protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| No external refs found! |
