GSVIVT01033273001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01033273001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00216470	RAP2.7, TOE1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Adi_g018198	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aev_g09099	RAP2.7, TOE1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g05510	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ala_g33374	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aob_g21188	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene08424.t1	WRI1, ATWRI1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.13G003200.1	RAP2.7, TOE1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dde_g42409	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01016352001	RAP2.7, TOE1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
LOC_Os05g32270.1	LOC_Os05g32270	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Msp_g43589	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Pir_g37453	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g40008	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g64020	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Sam_g13728	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Solyc02g064960.3.1	AP2, FLO2, FL1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Spa_g10818	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Spa_g28499	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g38474	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Spa_g50963	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e011950_P001	DRG, CKC, CKC1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004602	glutathione peroxidase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	HCCA
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
MF	GO:0008066	glutamate receptor activity	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009309	amine biosynthetic process	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009581	detection of external stimulus	IEP	HCCA
BP	GO:0009582	detection of abiotic stimulus	IEP	HCCA
BP	GO:0009583	detection of light stimulus	IEP	HCCA
BP	GO:0009584	detection of visible light	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0018298	obsolete protein-chromophore linkage	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022835	transmitter-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0030410	nicotianamine synthase activity	IEP	HCCA
BP	GO:0030417	nicotianamine metabolic process	IEP	HCCA
BP	GO:0030418	nicotianamine biosynthetic process	IEP	HCCA
MF	GO:0030594	neurotransmitter receptor activity	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
BP	GO:0042401	biogenic amine biosynthetic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051606	detection of stimulus	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	HCCA
BP	GO:0072351	tricarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	70	129

External Links

No external refs found!

GSVIVT01033273001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation