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  5. GSVIVT01033300001

GSVIVT01033300001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0002397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033300001
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT2G41835 No alias zinc finger (C2H2 type, AN1-like) family protein 0.03 OrthoFinder output from all 47 species
Adi_g060268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29975 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g10313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27980.t2 Aspi01Gene27980 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54444.t1 Aspi01Gene54444 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_16838 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g20576 PMZ, SAP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10026 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g10051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000986 No alias not classified & original description: CDS=241-810 0.03 OrthoFinder output from all 47 species
Solyc02g087210.3.1 PMZ, SAP12,... C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 13 51
IPR000058 Znf_AN1 101 141
No external refs found!