GSVIVT01033645001 (PGP1, ABCB1, ATPGP1)


Aliases : PGP1, ABCB1, ATPGP1

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033645001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00164980 ATPGP4, PGP4,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G02530 PGP12 P-glycoprotein 12 0.04 OrthoFinder output from all 47 species
AT3G28360 PGP16 P-glycoprotein 16 0.03 OrthoFinder output from all 47 species
Adi_g010407 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021749 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g025752 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058585 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067518 PGP1, ABCB1, ATPGP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087061 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07132 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26174 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05763 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07131 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34073 PGP20 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51317 ABCB19,... ABC-B-type transporter *(AMN3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14003 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22258 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g32929 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20710.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35821.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43898.t1 PGP20, Aspi01Gene43898 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45615.t1 PGP11, Aspi01Gene45615 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46795.t1 PGP2, Aspi01Gene46795 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52651.t1 PGP2, Aspi01Gene52651 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62048.t2 PGP2, Aspi01Gene62048 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010080 PGP2 subfamily ABCB transporter & original description: CDS=691-4485 0.04 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.02 OrthoFinder output from all 47 species
Azfi_s0099.g044118 PGP20 subfamily ABCB transporter & original description: CDS=2010-6257 0.04 OrthoFinder output from all 47 species
Azfi_s0232.g059284 PGP13 subfamily ABCB transporter & original description: CDS=307-4314 0.04 OrthoFinder output from all 47 species
Cba_g17313 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G076400.1 ABCB19,... subfamily ABCB transporter & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000025.2 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g06724 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07802 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14063 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18848 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21301 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40237 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12428 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40826 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30303 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21294 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013125001 PGP2 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_07563 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_08615 PGP11 ABC transporter B family member 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_08616 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_11202 PGP11 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Gb_13906 PGP2 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_18150 PGP13 auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.06 OrthoFinder output from all 47 species
Gb_32125 PGP11 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_32487 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_33057 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_33058 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os04g38570.1 ABCB19,... auxin efflux transporter (ABCB19) 0.03 OrthoFinder output from all 47 species
LOC_Os08g05690.1 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Len_g14182 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16090 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434957g0010 PGP1, ABCB1, ATPGP1 ABC transporter B family member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp2g02910.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp2g06270.1 PGP20 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Msp_g31505 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03862 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09833 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29842 PGP10 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35743 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43029 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_16450V3.1 ABCB19,... ATP binding cassette subfamily B19 0.02 OrthoFinder output from all 47 species
Ppi_g07008 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17867 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035 PGP13 subfamily ABCB transporter & original description: CDS=555-4511 0.03 OrthoFinder output from all 47 species
Smo230688 ABCB19,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo408755 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc02g087870.3.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc09g008240.3.1 PGP1, ABCB1,... subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Spa_g06203 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08601 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18839 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19381 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21974 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50021 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31718 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014797_P002 Zm00001e014797 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Zm00001e025438_P001 PGP21, Zm00001e025438 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 343 524
IPR011527 ABC1_TM_dom 2 273
IPR011527 ABC1_TM_dom 690 947
No external refs found!