Aliases : CRR22
Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00032p00190360 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00129p00082590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G35030 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G40405 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g035612 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g069053 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18046 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g24191 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g26256 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g34629 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07446 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0010.g012398 | No alias | not classified & original description: CDS=1-3681 | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g06861 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07408 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g24308 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g35191 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G003100.1 | Ceric.06G003100 | not classified & original description: pacid=50620504... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g07753 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g09752 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g38590 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g40971 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g42474 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g13146 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29669 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028747001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01037377001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g72049.1 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g24150.1 | LOC_Os05g24150 | Pentatricopeptide repeat-containing protein At2g34400... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g38190.2 | LOC_Os05g38190 | Pentatricopeptide repeat-containing protein At2g27610... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os07g10400.1 | CRR22, LOC_Os07g10400 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.09 | OrthoFinder output from all 47 species | |
| Len_g03400 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03902 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19014 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g33284 | No alias | not classified & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Len_g34134 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g34524 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19382 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g19660 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41304 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g07587 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g52827 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59330 | OTP84 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000644 | No alias | not classified & original description: CDS=1-2820 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007452 | No alias | not classified & original description: CDS=1-2322 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0020.g008098 | CRR22 | not classified & original description: CDS=1-2784 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0023.g008877 | No alias | not classified & original description: CDS=1-2595 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0026.g009486 | No alias | not classified & original description: CDS=1-3465 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0032.g010805 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=294-2756 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0051.g013942 | No alias | not classified & original description: CDS=1-3669 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0062.g015487 | No alias | not classified & original description: CDS=260-3676 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0072.g016963 | No alias | not classified & original description: CDS=1-2211 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0101.g019840 | No alias | not classified & original description: CDS=144-2663 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0129.g021987 | No alias | not classified & original description: CDS=1-1590 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0139.g022629 | No alias | not classified & original description: CDS=614-2965 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0157.g023714 | No alias | not classified & original description: CDS=1-2772 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0198.g025546 | No alias | not classified & original description: CDS=1-3414 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0250.g026755 | CRR22 | not classified & original description: CDS=1-2307 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g09072 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13891 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18645 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g22188 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g22475 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24543 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25159 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35988 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g43221 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g48950 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g51541 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11331 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g11463 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17876 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g17888 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26293 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028330_P001 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 628 | 653 |
| IPR002885 | Pentatricopeptide_repeat | 427 | 456 |
| IPR002885 | Pentatricopeptide_repeat | 145 | 174 |
| IPR032867 | DYW_dom | 727 | 851 |
| IPR002885 | Pentatricopeptide_repeat | 553 | 600 |
| IPR002885 | Pentatricopeptide_repeat | 223 | 271 |
| IPR002885 | Pentatricopeptide_repeat | 323 | 370 |
| No external refs found! |
