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  5. GSVIVT01034121001

GSVIVT01034121001


No description available


Gene families : OG0001920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001920_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034121001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00226820 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G04550 No alias Protein of unknown function (DUF668) 0.04 OrthoFinder output from all 47 species
AT5G51670 No alias Protein of unknown function (DUF668) 0.03 OrthoFinder output from all 47 species
Aev_g01433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15638.t1 Aspi01Gene15638 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01034732001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g62670.1 LOC_Os01g62670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g08764.1 LOC_Os04g08764 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g38320.1 LOC_Os05g38320 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g05425 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_55500g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g24740.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g15418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g007090.1.1 Solyc03g007090 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g089640.2.1 Solyc09g089640 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g084880.3.1 Solyc10g084880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g007660.1.1 Solyc11g007660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e028760_P001 Zm00001e028760 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021864 DUF3475 37 92
IPR007700 DUF668 328 415
No external refs found!