Aliases : TY1, TRX-Y1, ATY1
Description : Redox homeostasis.chloroplast redox homeostasis.Y-type thioredoxin
Gene families : OG0006023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006023_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01034548001 | |
| Cluster | HCCA: Cluster_79 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G43560 | Aty2, ty2 | thioredoxin Y2 | 0.13 | OrthoFinder output from all 47 species | |
| Adi_g044598 | TY1, TRX-Y1, ATY1 | Y-type thioredoxin *(Trx-Y) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g06394 | TY1, TRX-Y1, ATY1 | Y-type thioredoxin *(Trx-Y) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g21672 | TY1, TRX-Y1, ATY1 | Y-type thioredoxin *(Trx-Y) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0872.g090693 | TY1, TRX-Y1, ATY1 | Y-type thioredoxin *(Trx-Y) & original description: CDS=1-615 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g08342 | TY1, TRX-Y1, ATY1 | Y-type thioredoxin *(Trx-Y) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g09879 | TY1, TRX-Y1, ATY1 | Y-type thioredoxin *(Trx-Y) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g73234.1 | TY1, TRX-Y1,... | Y-type thioredoxin | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g071560.4.1 | TY1, TRX-Y1,... | Y-type thioredoxin | 0.11 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0045454 | cell redox homeostasis | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0051920 | peroxiredoxin activity | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013766 | Thioredoxin_domain | 72 | 168 |
| No external refs found! |
