Description : Protein biosynthesis.translation initiation.eIF5B Met-tRNA positioning factor
Gene families : OG0003112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003112_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G21160 | No alias | eukaryotic translation initiation factor 2 (eIF-2) family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G76810 | No alias | eukaryotic translation initiation factor 2 (eIF-2) family protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g012011 | No alias | Met-tRNA positioning component *(eIF5B) of initiator... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g12293 | No alias | Met-tRNA positioning component *(eIF5B) of initiator... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g37468 | No alias | Met-tRNA positioning component *(eIF5B) of initiator... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02700 | No alias | Met-tRNA positioning component *(eIF5B) of initiator... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22498 | No alias | Met-tRNA positioning component *(eIF5B) of initiator... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g07436 | No alias | Met-tRNA positioning component *(eIF5B) of initiator... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.31G051600.1 | Ceric.31G051600 | Met-tRNA positioning component *(eIF5B) of initiator... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03209 | No alias | Met-tRNA positioning component *(eIF5B) of initiator... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g14997 | No alias | Met-tRNA positioning component *(eIF5B) of initiator... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g51500.1 | LOC_Os05g51500 | Met-tRNA positioning component eIF5B of initiator tRNA... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03512 | No alias | Met-tRNA positioning component *(eIF5B) of initiator... | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g09260.1 | No alias | Met-tRNA positioning component eIF5B of initiator tRNA... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g13519 | No alias | Met-tRNA positioning component *(eIF5B) of initiator... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g16364 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25594 | No alias | Met-tRNA positioning component *(eIF5B) of initiator... | 0.02 | OrthoFinder output from all 47 species | |
| Smo166557 | No alias | Protein biosynthesis.translation initiation.eIF5B... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g058350.4.1 | Solyc03g058350 | Met-tRNA positioning component eIF5B of initiator tRNA... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc03g058390.2.1 | Solyc03g058390 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g054400.3.1 | Solyc06g054400 | Met-tRNA positioning component eIF5B of initiator tRNA... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g56625 | No alias | Met-tRNA positioning component *(eIF5B) of initiator... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026670_P001 | Zm00001e026670 | Met-tRNA positioning component eIF5B of initiator tRNA... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005525 | GTP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| CC | GO:0048500 | signal recognition particle | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051170 | import into nucleus | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| MF | GO:0061608 | nuclear import signal receptor activity | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| No external refs found! |
