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  5. GSVIVT01035023001

GSVIVT01035023001


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL29 component


Gene families : OG0004690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035023001
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT3G06680 No alias Ribosomal L29e protein family 0.07 OrthoFinder output from all 47 species
AT3G06700 No alias Ribosomal L29e protein family 0.03 OrthoFinder output from all 47 species
Als_g56710 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007916 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043647 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Ceric.39G032900.1 Ceric.39G032900 component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre03.g207050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
Ehy_g23105 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Gb_37735 No alias component RPL29 of LSU proteome component 0.05 OrthoFinder output from all 47 species
MA_10433318g0010 No alias component RPL29 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp1g23580.1 No alias component RPL29 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Pp3c14_7570V3.1 Pp3c14_7570 Ribosomal L29e protein family 0.05 OrthoFinder output from all 47 species
Pp3c1_34380V3.1 Pp3c1_34380 Ribosomal L29e protein family 0.05 OrthoFinder output from all 47 species
Ppi_g34065 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009764 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g17848 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo228166 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Spa_g43144 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR002673 Ribosomal_L29e 3 42
No external refs found!