Aliases : ARF8, ATARF8
Description : Auxin response factor 12 OS=Oryza sativa subsp. japonica
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00157690 | ARF6,... | RNA biosynthesis.transcriptional activation.B3... | 0.06 | OrthoFinder output from all 47 species | |
| AT4G23980 | ARF9 | auxin response factor 9 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g014286 | ARF4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g025684 | ARF9 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g057044 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g059116 | ARF6 | transcriptional repressor *(IAA/AUX) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g088063 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g088539 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g103007 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g06038 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14726 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g51944 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene06586.t1 | ARF6, Aspi01Gene06586 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene45721.t2 | ARF6, Aspi01Gene45721 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene51864.t1 | ARF16, Aspi01Gene51864 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012740 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: CDS=1-2724 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0038.g026103 | ARF6 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0384.g067487 | ARF8, ATARF8 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g04069 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g11427 | ARF6 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g78264 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.29G070000.1 | ARF6, Ceric.29G070000 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.35G054000.1 | ARF6, Ceric.35G054000 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05759 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g05781 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g32674 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36299 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g16727 | ARF16 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g08681 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09257 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g11966 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g20778 | ARF14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g22354 | ARF6 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g27083 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g27900 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_23186 | HSS, ARF1-BP, ARF2, ORE14 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_31132 | ARF4 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_39686 | ARF6 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g56850.1 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g59430.1 | ARF17, LOC_Os04g59430 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g48950.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g33940.1 | ARF16, LOC_Os10g33940 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08347 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g12750.1 | ARF6 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13886 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g50454 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g19455 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g25925 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0042.g012712 | ARF6 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g04406 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g037530.3.1 | ARF8, ATARF8,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g077560.3.1 | ARF3, ETT, Solyc02g077560 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g29254 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003229_P002 | ARF6, Zm00001e003229 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006577_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e006640_P002 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018126_P002 | ARF6, Zm00001e018126 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030325_P003 | ARF6, Zm00001e030325 | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e032423_P002 | ARF3, ETT, Zm00001e032423 | transcription factor (ARF) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e041866_P001 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e041910_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033389 | AUX/IAA_dom | 33 | 121 |
| No external refs found! |
