Aliases : ATRPA2, ATRPA32A, RPA2, ROR1, RPA32A
Description : Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA2 component
Gene families : OG0003036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003036_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01035537001 | |
| Cluster | HCCA: Cluster_85 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00238780 | ATRPA2,... | Cell cycle.mitosis and meiosis.meiotic recombination.DNA... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00019p00256940 | ATRPA32B,... | Cell cycle.mitosis and meiosis.meiotic recombination.DNA... | 0.06 | OrthoFinder output from all 47 species | |
| AT2G24490 | ATRPA2,... | replicon protein A2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g104425 | ATRPA32B, RPA32B | component *(RPA2) of RPA presynaptic filament assembly... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene30280.t1 | ATRPA32B,... | component *(RPA2) of RPA presynaptic filament assembly... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene60045.t1 | ATRPA32B,... | component *(RPA2) of RPA presynaptic filament assembly... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0074.g037483 | ATRPA32B, RPA32B | component *(RPA2) of RPA presynaptic filament assembly... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.28G042500.1 | ATRPA32B,... | component *(RPA2) of RPA presynaptic filament assembly... | 0.17 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020684.26 | No alias | Cell cycle.mitosis and meiosis.meiotic recombination.DNA... | 0.09 | OrthoFinder output from all 47 species | |
| Cre02.g100000 | ATRPA32B, RPA32B | Cell cycle.mitosis and meiosis.meiotic recombination.DNA... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_15876 | ATRPA32B, RPA32B | component RPA2 of single-stranded-DNA binding RPA... | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os02g58220.1 | ATRPA2,... | component RPA2 of single-stranded-DNA binding RPA... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10816 | ATRPA32B, RPA32B | component *(RPA2) of RPA presynaptic filament assembly... | 0.09 | OrthoFinder output from all 47 species | |
| MA_10607g0010 | ATRPA32B, RPA32B | component RPA2 of single-stranded-DNA binding RPA... | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g22240.1 | ATRPA32B, RPA32B | component RPA2 of single-stranded-DNA binding RPA... | 0.23 | OrthoFinder output from all 47 species | |
| Msp_g09786 | ATRPA32B, RPA32B | component *(RPA2) of RPA presynaptic filament assembly... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g01656 | No alias | component *(RPA2) of RPA presynaptic filament assembly... | 0.08 | OrthoFinder output from all 47 species | |
| Smo440021 | ATRPA2,... | Cell cycle.mitosis and meiosis.meiotic recombination.DNA... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc07g018300.3.1 | ATRPA2,... | component RPA2 of single-stranded-DNA binding RPA... | 0.22 | OrthoFinder output from all 47 species | |
| Spa_g07704 | ATRPA32B, RPA32B | component *(RPA2) of RPA presynaptic filament assembly... | 0.16 | OrthoFinder output from all 47 species | |
| Spa_g07705 | ATRPA32B, RPA32B | component *(RPA2) of RPA presynaptic filament assembly... | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g07706 | ATRPA32B, RPA32B | component *(RPA2) of RPA presynaptic filament assembly... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g05426 | ATRPA32B, RPA32B | component *(RPA2) of RPA presynaptic filament assembly... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016275_P001 | ATRPA2,... | component RPA2 of single-stranded-DNA binding RPA... | 0.13 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| CC | GO:0000808 | origin recognition complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0003896 | DNA primase activity | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | HCCA |
| BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0007059 | chromosome segregation | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051301 | cell division | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR014892 | RPA_C | 156 | 259 |
| No external refs found! |
