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  5. GSVIVT01035614001

GSVIVT01035614001


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035614001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00074220 GATA4,... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
AMTR_s00011p00253850 HAN, MNP,... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
AMTR_s00056p00080350 GATA9,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00136770 GATA4,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00148p00049970 BME3-ZF, BME3,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AT2G45050 GATA2 GATA transcription factor 2 0.07 OrthoFinder output from all 47 species
AT3G20750 GATA29 GATA transcription factor 29 0.04 OrthoFinder output from all 47 species
AT4G34680 GATA3 GATA transcription factor 3 0.05 OrthoFinder output from all 47 species
AT5G26930 GATA23 GATA transcription factor 23 0.04 OrthoFinder output from all 47 species
Adi_g021303 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022369 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058312 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058313 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082687 GATA5 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03153 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16772 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17574 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32134 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09430 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07273 GATA12 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20978 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38669 GATA2 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43029 GATA9 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g48899 GATA4 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g52135 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23859 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09752 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12583 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62121 GATA12 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30025.t1 GATA5, Aspi01Gene30025 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene33196.t1 GATA12, Aspi01Gene33196 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57616.t1 GATA5, Aspi01Gene57616 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60517.t1 GATA20, Aspi01Gene60517 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61259.t1 GATA15, Aspi01Gene61259 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67105.t1 GATA5, Aspi01Gene67105 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69106.t1 GATA4, Aspi01Gene69106 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69371.t1 GATA12, Aspi01Gene69371 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0078.g038241 GATA4 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g02619 GATA2 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04557 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05826 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11674 BME3-ZF, BME3, GATA8 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g70889 GATA7 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G090400.1 GATA12, Ceric.01G090400 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.01G091100.1 GATA9, Ceric.01G091100 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.04G070700.1 GATA20, Ceric.04G070700 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G063400.1 GATA12, Ceric.07G063400 transcription factor *(A/B-GATA) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.07G072600.1 GATA9, Ceric.07G072600 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.17G054000.1 GATA5, Ceric.17G054000 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.18G043900.1 GATA15, Ceric.18G043900 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G025900.1 GATA9, Ceric.25G025900 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.27G027400.1 GATA12, Ceric.27G027400 transcription factor *(A/B-GATA) & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.34G071700.1 GATA5, Ceric.34G071700 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G025300.1 GATA20, Ceric.35G025300 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G061000.1 GATA12, Ceric.36G061000 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g11064 GATA5 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05309 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06887 GATA2 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15306 GATA9 transcription factor *(A/B-GATA) & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g18881 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05496 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06602 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06867 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08197 GATA1 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14273 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18348 GATA1 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21727 GATA1 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017011001 GATA12 RNA biosynthesis.transcriptional activation.C2C2... 0.08 OrthoFinder output from all 47 species
GSVIVT01018833001 GATA5 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Gb_13387 GATA9 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Gb_24250 GATA9 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Gb_25568 GATA20 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Gb_34837 GATA20 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os01g47360.1 GATA20, LOC_Os01g47360 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os02g12790.1 GATA22, CGA1,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os02g43150.1 GATA5, LOC_Os02g43150 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45650.2 GATA5, LOC_Os04g45650 transcription factor (GATA) 0.06 OrthoFinder output from all 47 species
LOC_Os05g44400.1 GATA12, LOC_Os05g44400 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
LOC_Os09g08150.1 LOC_Os09g08150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g32070.1 GATA1, LOC_Os10g32070 transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
LOC_Os10g40810.1 GATA2, LOC_Os10g40810 transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
LOC_Os12g07120.1 GATA14, LOC_Os12g07120 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Len_g03294 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08386 GATA12 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24180 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54486 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434815g0010 GATA4 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
MA_10436047g0010 GATA17 transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
MA_44185g0010 GATA4 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
MA_92522g0010 GATA20 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Mp7g03490.1 GATA23 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Msp_g37564 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02094 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13065 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34157 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14050 GATA19 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26719 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29813 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30519 GATA2 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40724 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14533 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g37587 GATA15 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37666 BME3-ZF, BME3, GATA8 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44466 GATA1 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22180 GATA9 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g25103 GATA1 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30108 GATA12 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000079 GATA9 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009072 GATA4 transcription factor *(A/B-GATA) & original description:... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015681 GATA12 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023073 GATA9 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025334 GATA12 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0211.g025929 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description:... 0.06 OrthoFinder output from all 47 species
Sam_g08124 No alias transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39003 No alias transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g085190.2.1 HAN, MNP,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc04g015360.3.1 BME3-ZF, BME3,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc05g056120.3.1 BME3-ZF, BME3,... transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Solyc08g066510.3.1 GATA12, Solyc08g066510 transcription factor (GATA) 0.07 OrthoFinder output from all 47 species
Solyc10g018560.2.1 GATA4, Solyc10g018560 transcription factor (GATA) 0.06 OrthoFinder output from all 47 species
Solyc12g008830.3.1 GNC, GATA21,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Spa_g12632 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29134 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50117 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55775 GATA12 transcription factor *(A/B-GATA) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e006272_P001 GATA17, Zm00001e006272 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e015260_P001 GATA5, Zm00001e015260 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Zm00001e018438_P001 GATA4, Zm00001e018438 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e026256_P001 GATA23, Zm00001e026256 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e026601_P001 GATA20, Zm00001e026601 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e029060_P002 GATA9, Zm00001e029060 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e032513_P001 Zm00001e032513 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037876_P002 GATA4, Zm00001e037876 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Zm00001e039467_P001 GATA14, Zm00001e039467 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e039468_P001 Zm00001e039468 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e039469_P001 GATA12, Zm00001e039469 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e041332_P001 GATA5, Zm00001e041332 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 75 108
No external refs found!