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  5. GSVIVT01036346001

GSVIVT01036346001


Description : Valencene synthase OS=Vitis vinifera


Gene families : OG0000499 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000499_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036346001
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00174180 TPS10,... Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase 0.03 OrthoFinder output from all 47 species
AMTR_s00007p00269150 TPS03, ATTPS03,... Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00219230 ATTPS-CIN,... Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00219920 TPS02,... Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
AT2G24210 TPS10 terpene synthase 10 0.06 OrthoFinder output from all 47 species
AT3G25810 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G25820 ATTPS-CIN, TPS-CIN terpene synthase-like sequence-1,8-cineole 0.04 OrthoFinder output from all 47 species
AT3G25830 ATTPS-CIN, TPS-CIN terpene synthase-like sequence-1,8-cineole 0.04 OrthoFinder output from all 47 species
AT4G16730 TPS02 terpene synthase 02 0.04 OrthoFinder output from all 47 species
AT4G16740 TPS03, ATTPS03 terpene synthase 03 0.03 OrthoFinder output from all 47 species
AT5G48110 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.05 OrthoFinder output from all 47 species
GSVIVT01000402001 ATTPS-CIN, TPS-CIN Tricyclene synthase EBOS, chloroplastic OS=Lotus japonicus 0.06 OrthoFinder output from all 47 species
GSVIVT01006399001 TPS03, ATTPS03 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
GSVIVT01012363001 No alias (-)-alpha-terpineol synthase OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
GSVIVT01014325001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
GSVIVT01014557001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
GSVIVT01014566001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
GSVIVT01014569001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
GSVIVT01033458001 TPS03, ATTPS03 Probable terpene synthase 9 OS=Ricinus communis 0.03 OrthoFinder output from all 47 species
GSVIVT01036325001 ATTPS21, TPS21 Valencene synthase OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
GSVIVT01036328001 No alias Valencene synthase OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01036330001 ATTPS21, TPS21 Valencene synthase OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
GSVIVT01036340001 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
GSVIVT01036344001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
GSVIVT01036361001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
GSVIVT01036366001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
GSVIVT01036371001 ATTPS21, TPS21 Valencene synthase OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01036374001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
Gb_15698 TPS02 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Gb_16024 TPS02 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Gb_16025 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Gb_24809 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Gb_32501 TPS02 mono-/sesquiterpene-/diterpene synthase 0.05 OrthoFinder output from all 47 species
LOC_Os03g22634.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
LOC_Os03g24640.1 TPS02, LOC_Os03g24640 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os04g27070.1 LOC_Os04g27070 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os04g27790.1 LOC_Os04g27790 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os05g24500.1 LOC_Os05g24500 no description available(sp|q5gj59|tps7_maize : 201.0) &... 0.03 OrthoFinder output from all 47 species
LOC_Os08g04500.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
MA_10302367g0010 No alias mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_10430954g0010 ATTPS14, TPS14 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_10434542g0010 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
MA_180385g0010 No alias (-)-alpha-terpineol synthase, chloroplastic OS=Pinus... 0.03 OrthoFinder output from all 47 species
MA_25537g0010 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_5583880g0010 TPS02 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_70145g0010 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
MA_9831579g0010 No alias Beta-phellandrene synthase, chloroplastic OS=Abies... 0.04 OrthoFinder output from all 47 species
Pir_g29405 ATTPS21, TPS21 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g101170.4.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Solyc01g101180.4.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Solyc01g101190.3.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Solyc01g101210.4.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Solyc01g105850.3.1 TPS02, Solyc01g105850 mono-/sesquiterpene-/diterpene synthase 0.06 OrthoFinder output from all 47 species
Solyc01g105860.3.1 Solyc01g105860 (-)-camphene/tricyclene synthase, chloroplastic... 0.08 OrthoFinder output from all 47 species
Solyc01g105870.3.1 Solyc01g105870 mono-/sesquiterpene-/diterpene synthase 0.06 OrthoFinder output from all 47 species
Solyc01g105890.3.1 Solyc01g105890 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Solyc04g054380.1.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Solyc06g059930.4.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.08 OrthoFinder output from all 47 species
Solyc07g008690.3.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Solyc07g052150.4.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Solyc12g006570.2.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Zm00001e001692_P001 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Zm00001e029665_P001 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.07 OrthoFinder output from all 47 species
Zm00001e039946_P001 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Zm00001e040154_P001 Zm00001e040154 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 74 236
No external refs found!