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  5. GSVIVT01036400001

GSVIVT01036400001


Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036400001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00089620 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00215980 evm_27.TU.AmTr_v1... Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1... 0.04 OrthoFinder output from all 47 species
AMTR_s00109p00126980 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G17600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G17610 No alias Disease resistance protein (TIR-NBS class) 0.04 OrthoFinder output from all 47 species
AT1G17615 No alias Disease resistance protein (TIR-NBS class) 0.05 OrthoFinder output from all 47 species
AT1G31540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT1G56510 WRR4, ADR2 Disease resistance protein (TIR-NBS-LRR class) 0.04 OrthoFinder output from all 47 species
AT1G56520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.08 OrthoFinder output from all 47 species
AT1G63880 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G65850 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G69550 No alias disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from all 47 species
AT2G14080 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT2G16870 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT3G04210 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT3G44480 cog1, RPP1 Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT3G44670 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT4G09360 No alias NB-ARC domain-containing disease resistance protein 0.05 OrthoFinder output from all 47 species
AT4G16857 No alias No description available 0.04 OrthoFinder output from all 47 species
AT4G16890 SNC1, BAL disease resistance protein (TIR-NBS-LRR class), putative 0.04 OrthoFinder output from all 47 species
AT4G16920 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT4G16950 RPP5 Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT4G16990 RLM3 disease resistance protein (TIR-NBS class), putative 0.03 OrthoFinder output from all 47 species
AT5G18360 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G36930 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.07 OrthoFinder output from all 47 species
AT5G46260 No alias disease resistance protein (TIR-NBS-LRR class) family 0.07 OrthoFinder output from all 47 species
AT5G46450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G46470 RPS6 disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G46490 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.07 OrthoFinder output from all 47 species
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.04 OrthoFinder output from all 47 species
AT5G46520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.08 OrthoFinder output from all 47 species
AT5G58120 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Adi_g060996 No alias plastidial ribosome biogenesis factor *(PAC) & original... 0.03 OrthoFinder output from all 47 species
Adi_g084422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g088561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004877001 No alias External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
GSVIVT01029009001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_03483 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_04201 No alias effector receptor (NLR) 0.07 OrthoFinder output from all 47 species
Gb_11158 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_12318 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_17905 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.07 OrthoFinder output from all 47 species
Gb_21493 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.09 OrthoFinder output from all 47 species
Gb_25646 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_26262 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Gb_27878 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.07 OrthoFinder output from all 47 species
Gb_29198 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
Gb_33268 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_33283 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_33284 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_36252 No alias effector receptor (NLR) 0.07 OrthoFinder output from all 47 species
Gb_36253 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
MA_10324896g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_10429769g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_10432202g0030 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_10432451g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_10436141g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.05 OrthoFinder output from all 47 species
MA_10436643g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_129800g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.06 OrthoFinder output from all 47 species
MA_191084g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_20580g0030 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_20580g0040 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_232404g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_263716g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.06 OrthoFinder output from all 47 species
MA_395749g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_4175g0020 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.06 OrthoFinder output from all 47 species
MA_430605g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_450622g0010 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
MA_5053586g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_509167g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_612059g0010 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
MA_61439g0020 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.06 OrthoFinder output from all 47 species
MA_6891298g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8328499g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8647159g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.06 OrthoFinder output from all 47 species
MA_8647715g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_9584314g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_9873718g0020 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Pp3c4_30410V3.1 Pp3c4_30410 Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
Solyc01g008800.3.1 Solyc01g008800 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Solyc01g102840.3.1 Solyc01g102840 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Solyc01g102850.3.1 Solyc01g102850 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Solyc04g007320.3.1 Solyc04g007320 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Solyc05g007850.2.1 Solyc05g007850 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 207 428
IPR011713 Leu-rich_rpt_3 624 643
IPR000157 TIR_dom 19 188
No external refs found!