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  5. GSVIVT01036408001

GSVIVT01036408001


Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036408001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00250780 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.01 OrthoFinder output from all 47 species
AT1G61105 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.25 OrthoFinder output from all 47 species
AT2G20142 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.01 OrthoFinder output from all 47 species
AT3G04220 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
AT4G11170 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT4G14370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT5G41550 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
AT5G41740 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
Aob_g11473 WRKY16, ATWRKY16, TTR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30097 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67283 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10435728g0030 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
MA_131802g0020 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_31007g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
MA_6801442g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g14760 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g12589 LAZ5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g26575 RPP13 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g24673 No alias effector receptor *(NLR) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45853 No alias effector receptor *(NLR) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48708 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g102930.1.1 Solyc01g102930 no description available(sp|f4jt78|rpp2a_arath : 145.0) 0.01 OrthoFinder output from all 47 species
Solyc12g096880.3.1 Solyc12g096880 effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Spa_g07632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 209 419
IPR000157 TIR_dom 15 192
No external refs found!