GSVIVT01037333001 (HSFB4, SCZ, AT-HSFB4)

Aliases : HSFB4, SCZ, AT-HSFB4

Description : RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01037333001
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00073p00033500	HSFB4, SCZ,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
Aev_g17393	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11376	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os03g58160.1	AT-HSFA6B,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
MA_13910g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Pir_g29245	HSF4, HSFB1,...	HSF-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Pir_g30346	HSF A4A, AT-HSFA4A	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g28968	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0224.g026285	ATHSF1, HSF1,...	HSF-type transcription factor & original description: CDS=1-2472	0.03	OrthoFinder output from all 47 species
Solyc06g053960.3.1	AT-HSFA6B,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Zm00001e035680_P002	HSFB4, SCZ,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006855	xenobiotic transmembrane transport	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
BP	GO:0042908	xenobiotic transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	25	114

External Links

No external refs found!

GSVIVT01037333001 (HSFB4, SCZ, AT-HSFB4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation