GSVIVT01037646001


Description : Uncharacterized protein At5g41620 OS=Arabidopsis thaliana


Gene families : OG0000738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000738_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037646001

Target Alias Description ECC score Gene Family Method Actions
AT1G11690 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Adi_g080767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012735001 No alias Uncharacterized protein At5g41620 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
LOC_Os06g31190.1 LOC_Os06g31190 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g29743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49927 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc06g074190.3.1 Solyc06g074190 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc07g064580.3.1 Solyc07g064580 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc08g081830.3.1 Solyc08g081830 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Tin_g07954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e030712_P001 Zm00001e030712 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!