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  5. GSVIVT01037844001

GSVIVT01037844001


Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional BXL-type alpha-L-arabinofuranosidase and beta-D-xylosidase


Gene families : OG0001022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001022_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: GSVIVT01037844001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246460 XYL4, ATBXL4,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AT5G09730 BXL3, BX3, XYL3,... beta-xylosidase 3 0.03 OrthoFinder output from all 47 species
AT5G49360 ATBXL1, BXL1 beta-xylosidase 1 0.03 OrthoFinder output from all 47 species
Cba_g61101 ATBXL2, BXL2 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_32463 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
Gb_34864 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Gb_39728 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
LOC_Os02g51620.1 LOC_Os02g51620 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
LOC_Os11g19160.1 LOC_Os11g19160 bifunctional alpha-L-arabinofuranosidase and... 0.05 OrthoFinder output from all 47 species
LOC_Os11g19210.1 LOC_Os11g19210 bifunctional alpha-L-arabinofuranosidase and... 0.05 OrthoFinder output from all 47 species
MA_249055g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
MA_99945g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Mp5g02880.1 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Ore_g43289 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06957 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007432_P001 Zm00001e007432 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
Zm00001e008876_P002 Zm00001e008876 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Zm00001e037605_P001 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 133 375
IPR002772 Glyco_hydro_3_C 423 653
IPR026891 Fn3-like 679 750
No external refs found!