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  5. GSVIVT01037861001

GSVIVT01037861001


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component


Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037861001

Target Alias Description ECC score Gene Family Method Actions
AT2G14850 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT4G33890 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Adi_g103257 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Ala_g01945 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Als_g26308 No alias component *(ADA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
LOC_Os04g56300.1 LOC_Os04g56300 component ADA1 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Ore_g41455 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Pir_g61284 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Sam_g10664 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Solyc03g117820.1.1 Solyc03g117820 component ADA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Solyc06g068610.3.1 Solyc06g068610 component ADA1 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Zm00001e003039_P001 Zm00001e003039 component ADA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Zm00001e006681_P001 Zm00001e006681 component ADA1 of SAGA transcription co-activator complex 0.05 OrthoFinder output from all 47 species
Zm00001e041823_P001 Zm00001e041823 component ADA1 of SAGA transcription co-activator complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 117 222
IPR024738 Hfi1/Tada1 7 84
No external refs found!