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  5. GSVIVT01038117001

GSVIVT01038117001 (ATEP3, EP3, CHIV, ATCHITIV)


Aliases : ATEP3, EP3, CHIV, ATCHITIV

Description : Endochitinase EP3 OS=Arabidopsis thaliana


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038117001
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Aev_g16347 HCHIB, B-CHI,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene32113.t1 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g18400.1 LOC_Os01g18400 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os04g41620.1 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os04g41680.1 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Pnu_g01615 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32706 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 261 306
IPR000726 Glyco_hydro_19_cat 109 253
IPR001002 Chitin-bd_1 61 92
No external refs found!