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  5. GSVIVT01038540001

GSVIVT01038540001 (PRB1, ATPRB1)


Aliases : PRB1, ATPRB1

Description : Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038540001
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263870 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
AMTR_s00012p00263950 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.05 OrthoFinder output from all 47 species
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00197310 evm_27.TU.AmTr_v1... Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
AT1G50060 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT2G19970 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT4G33730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT5G66590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
Aev_g41900 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21397 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g57903 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G049200.1 Ceric.33G049200 CAPE precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g13654 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20821 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33701 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08251 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22307 PRB1, ATPRB1 CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037000001 ATPR1, PR1, PR 1 Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.06 OrthoFinder output from all 47 species
Gb_07639 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 159.0) 0.03 OrthoFinder output from all 47 species
Gb_11050 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_11051 No alias Pathogenesis-related protein 1A OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Gb_20957 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os01g28450.1 ATPR1, PR1, PR... Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os01g28500.1 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.08 OrthoFinder output from all 47 species
LOC_Os02g27300.1 LOC_Os02g27300 Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54540.1 LOC_Os02g54540 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.06 OrthoFinder output from all 47 species
LOC_Os02g54560.1 LOC_Os02g54560 Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03279.1 LOC_Os07g03279 Basic form of pathogenesis-related protein 1... 0.05 OrthoFinder output from all 47 species
LOC_Os07g03319.1 LOC_Os07g03319 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03409.1 LOC_Os07g03409 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03458.1 LOC_Os07g03458 Basic form of pathogenesis-related protein 1... 0.05 OrthoFinder output from all 47 species
LOC_Os07g03499.1 LOC_Os07g03499 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03580.1 LOC_Os07g03580 Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
MA_102795g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.05 OrthoFinder output from all 47 species
MA_10428480g0010 No alias Basic form of pathogenesis-related protein 1... 0.04 OrthoFinder output from all 47 species
MA_501572g0010 No alias Basic form of pathogenesis-related protein 1... 0.03 OrthoFinder output from all 47 species
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.02 OrthoFinder output from all 47 species
Mp7g00440.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Nbi_g38284 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c18_21090V3.1 Pp3c18_21090 pathogenesis-related gene 1 0.03 OrthoFinder output from all 47 species
Ppi_g27336 No alias CAPE precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006515 No alias CAPE precursor polypeptide & original description: CDS=1-528 0.03 OrthoFinder output from all 47 species
Solyc02g065470.1.1 Solyc02g065470 STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 284.0) 0.03 OrthoFinder output from all 47 species
Solyc09g007010.1.1 Solyc09g007010 Pathogenesis-related leaf protein 4 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Tin_g36983 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002028_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Zm00001e005581_P001 Zm00001e005581 STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 129.0) 0.02 OrthoFinder output from all 47 species
Zm00001e023732_P001 Zm00001e023732 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
Zm00001e032757_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 33 149
No external refs found!