GSVIVT01038619001 (HB-12, ATHB-12, ATHB12)

Aliases : HB-12, ATHB-12, ATHB12

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP I/II transcription factor

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01038619001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00214750	HB6, ATHB6,...	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
AT2G46680	HB-7, ATHB-7, ATHB7	homeobox 7	0.02	OrthoFinder output from all 47 species
AT3G01220	ATHB20, HB20	homeobox protein 20	0.02	OrthoFinder output from all 47 species
AT3G01470	ATHB1, ATHB-1,...	homeobox 1	0.07	OrthoFinder output from all 47 species
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.04	OrthoFinder output from all 47 species
AT4G40060	ATHB16, HB16, ATHB-16	homeobox protein 16	0.06	OrthoFinder output from all 47 species
AT5G03790	HB51, ATHB51, LMI1	homeobox 51	0.05	OrthoFinder output from all 47 species
Aev_g04744	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Aev_g09308	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g10824	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aev_g25617	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Als_g23746	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aob_g11711	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.09	OrthoFinder output from all 47 species
Aspi01Gene06221.t1	ATHB40, HB40,...	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene53135.t1	ATHB3, HB-3,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene60040.t1	ATHB3, HB-3,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene68244.t1	ATHB3, HB-3,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Azfi_s3184.g114979	No alias	not classified & original description: CDS=620-892	0.02	OrthoFinder output from all 47 species
Cba_g08571	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Cba_g29320	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g06972	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g34453	No alias	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Dcu_g11055	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g10606	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g23915	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
LOC_Os03g08960.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Len_g10023	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g45930	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g51073	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Lfl_g22332	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
MA_128g0010	ATHB13	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
MA_3951g0010	ATHB13	transcription factor (HD-ZIP I/II)	0.06	OrthoFinder output from all 47 species
MA_60543g0010	ATHB3, HB-3, ATHB-3, HAT7	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Nbi_g29745	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.06	OrthoFinder output from all 47 species
Ore_g04447	ATHB16, HB16, ATHB-16	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ore_g17855	ATHB3, HB-3, ATHB-3, HAT7	regulatory protein *(LMI1) of floral meristem identity...	0.04	OrthoFinder output from all 47 species
Ore_g29472	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.05	OrthoFinder output from all 47 species
Pir_g28211	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Pir_g40580	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g02929	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Pnu_g15485	ATHB13	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Pnu_g26806	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Ppi_g63283	No alias	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Smo19476	ATHB3, HB-3, ATHB-3, HAT7	RNA biosynthesis.transcriptional activation.HB...	0.05	OrthoFinder output from all 47 species
Solyc03g034120.3.1	ATHB40, HB40,...	transcription factor (HD-ZIP I/II)	0.08	OrthoFinder output from all 47 species
Solyc08g083130.4.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Spa_g16234	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Tin_g09467	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.06	OrthoFinder output from all 47 species
Zm00001e000659_P001	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e015717_P003	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	24	78
IPR003106	Leu_zip_homeo	80	121

External Links

No external refs found!

GSVIVT01038619001 (HB-12, ATHB-12, ATHB12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation