Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase
Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01038754001 | |
| Cluster | HCCA: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0002.g001228 | No alias | pectin methylesterase & original description: CDS=1-1122 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19516 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G016900.1 | Ceric.26G016900 | pectin methylesterase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.37G019200.1 | Ceric.37G019200 | pectin methylesterase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| MA_99816g0010 | No alias | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
| BP | GO:0042545 | cell wall modification | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000070 | Pectinesterase_cat | 7 | 86 |
| No external refs found! |
