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  5. Cre01.g000850

Cre01.g000850


Description : Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.DAC factor


Gene families : OG0007052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g000850
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Adi_g011271 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Aev_g04394 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Ala_g00365 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Aop_g21364 No alias protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Aspi01Gene30737.t2 Aspi01Gene30737 protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Cba_g08738 No alias protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Dac_g14010 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Dcu_g16352 No alias protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Dde_g01199 No alias protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Ehy_g00546 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Len_g11472 No alias protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Nbi_g00338 No alias protein involved in cytochrome b6/f complex assembly... 0.01 OrthoFinder output from all 47 species
Ore_g04007 No alias protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Pir_g01527 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Ppi_g00421 No alias protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016133 No alias protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Smo406591 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004107 chorismate synthase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021562 DUF3007 77 172
No external refs found!