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  5. Cre01.g009900

Cre01.g009900


Description : Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0003957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g009900

Target Alias Description ECC score Gene Family Method Actions
Aev_g05402 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g06639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s2756.g112948 No alias not classified & original description: CDS=218-898 0.03 OrthoFinder output from all 47 species
Ceric.18G070000.1 Ceric.18G070000 not classified & original description: pacid=50621590... 0.05 OrthoFinder output from all 47 species
Dac_g21558 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g03038 No alias RNA chaperone component *(U11/U12-31K) of U11/U12 snRNP... 0.01 OrthoFinder output from all 47 species
Dde_g17732 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g05642 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_36817 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Gb_36818 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os01g53020.1 LOC_Os01g53020 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g10921 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g01647 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_213630g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9152890g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06753 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g47418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00796 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g15245 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc07g055260.3.1 Solyc07g055260 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g05014 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g09722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20619 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e028229_P001 Zm00001e028229 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e032179_P001 Zm00001e032179 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 44 105
No external refs found!