Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS21 | mtRPS21 component
Gene families : OG0004103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004103_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre01.g017300 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G27160 | GHS1 | Ribosomal protein S21 family protein | 0.15 | OrthoFinder output from all 47 species | |
| Aev_g09196 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g00986 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g01448 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Aob_g02683 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18482 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007465 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Cba_g02864 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g08732 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.13G030700.1 | Ceric.13G030700 | component *(bS21c) of small plastid ribosomal-subunit... | 0.16 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000863.30 | No alias | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g01906 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g41032 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Dde_g05601 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g00353 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Gb_06546 | GHS1 | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os02g09590.1 | GHS1, LOC_Os02g09590 | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.16 | OrthoFinder output from all 47 species | |
| Len_g15740 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g02717 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Lfl_g18474 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| MA_249305g0010 | No alias | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g21580.1 | No alias | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.26 | OrthoFinder output from all 47 species | |
| Msp_g36586 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g05106 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g01870 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g05303 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g59325 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c10_22890V3.1 | GHS1, Pp3c10_22890 | Ribosomal protein S21 family protein | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007775 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Smo444102 | No alias | Protein biosynthesis.organelle translation... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g068090.3.1 | GHS1, Solyc02g068090 | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g18473 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g07965 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013920_P001 | GHS1, Zm00001e013920 | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e025066_P001 | GHS1, Zm00001e025066 | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
