Aliases : GME
Description : Redox homeostasis.low-molecular-weight scavengers.ascorbate biosynthesis.GDP-D-mannose-epimerase (GME)
Gene families : OG0002260 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002260_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre01.g019250 | |
| Cluster | HCCA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g36259 | GME | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0104.g044834 | GME | EC_5.1 racemase or epimerase & original description: CDS=141-1298 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g31870 | GME | EC_5.1 racemase or epimerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g36486 | GME | EC_5.1 racemase or epimerase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g35322 | GME | EC_5.1 racemase or epimerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18967 | GME | EC_5.1 racemase or epimerase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Solyc09g082990.3.1 | GME, Solyc09g082990 | GDP-D-mannose-epimerase (GME) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e021256_P001 | GME, Zm00001e021256 | GDP-D-mannose-epimerase (GME) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | Interproscan |
| MF | GO:0050662 | obsolete coenzyme binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | HCCA |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0018279 | protein N-linked glycosylation via asparagine | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0035145 | exon-exon junction complex | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001509 | Epimerase_deHydtase | 32 | 266 |
| No external refs found! |
