1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre01.g034000

Cre01.g034000


Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB1 import karyopherin


Gene families : OG0001300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001300_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g034000
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00157820 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.01 OrthoFinder output from all 47 species
AMTR_s00058p00188470 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
AT3G08943 No alias ARM repeat superfamily protein 0.09 OrthoFinder output from all 47 species
Adi_g102316 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.01 OrthoFinder output from all 47 species
Ala_g03719 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.04 OrthoFinder output from all 47 species
Ala_g09011 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Als_g27083 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0061.g034897 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0062.g035201 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.10G004800.1 Ceric.10G004800 nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Dac_g07112 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Dac_g23155 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g04978 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.01 OrthoFinder output from all 47 species
Dcu_g07137 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Gb_04236 No alias IMB1 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species
LOC_Os05g28510.4 LOC_Os05g28510 IMB1 nucleocytoplasmic import karyopherin 0.07 OrthoFinder output from all 47 species
LOC_Os12g38110.1 LOC_Os12g38110 IMB1 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species
Len_g02910 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
MA_34778g0010 No alias IMB1 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species
MA_871185g0010 No alias IMB1 nucleocytoplasmic import karyopherin 0.01 OrthoFinder output from all 47 species
Mp6g11310.1 No alias IMB1 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
Msp_g06031 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.01 OrthoFinder output from all 47 species
Msp_g12557 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.01 OrthoFinder output from all 47 species
Ore_g30274 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g40488 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g08379 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g11141 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g02369 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.01 OrthoFinder output from all 47 species
Ppi_g16481 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g52654 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Smo124593 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Solyc06g052030.3.1 Solyc06g052030 IMB1 nucleocytoplasmic import karyopherin 0.05 OrthoFinder output from all 47 species
Tin_g04168 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e002934_P001 Zm00001e002934 IMB1 nucleocytoplasmic import karyopherin 0.06 OrthoFinder output from all 47 species
Zm00001e018172_P001 Zm00001e018172 IMB1 nucleocytoplasmic import karyopherin 0.06 OrthoFinder output from all 47 species
Zm00001e031516_P001 Zm00001e031516 IMB1 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 25 103
No external refs found!