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  5. Cre02.g085150

Cre02.g085150 (SPL4)


Aliases : SPL4

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g085150
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT1G53160 SPL4 squamosa promoter binding protein-like 4 0.01 OrthoFinder output from all 47 species
Adi_g029308 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g088745 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g38647 SPL8 SBP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g26615 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G013900.1 SPL8, Ceric.23G013900 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.39G052200.1 SPL8, Ceric.39G052200 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cre01.g033900 SPL5 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Cre01.g070932 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Cre04.g212700 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
GSVIVT01021087001 SPL3 RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder output from all 47 species
Gb_03920 SPL8 transcription factor (SBP) 0.01 OrthoFinder output from all 47 species
Lfl_g34701 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g33008 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18143 SPL3 SBP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e013198_P001 SPL2, Zm00001e013198 transcription factor (SBP) 0.01 OrthoFinder output from all 47 species
Zm00001e021425_P001 SPL13, SPL13A,... transcription factor (SBP) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 93 163
No external refs found!