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  5. Cre02.g110150

Cre02.g110150


Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g110150

Target Alias Description ECC score Gene Family Method Actions
AT5G50570 SPL13, SPL13A Squamosa promoter-binding protein-like (SBP domain)... 0.02 OrthoFinder output from all 47 species
AT5G50670 SPL13, SPL13B Squamosa promoter-binding protein-like (SBP domain)... 0.02 OrthoFinder output from all 47 species
Cre01.g043550 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Cre04.g212700 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Cre05.g233551 No alias RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
Cre10.g421550 SPL7, ATSPL7 RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
Cre16.g673250 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Ore_g18170 SPL2 SBP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g41765 SPL5 SBP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 570 642
IPR000210 BTB/POZ_dom 24 124
IPR011705 BACK 132 228
No external refs found!