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  5. Cre03.g151400

Cre03.g151400 (ABCA1, AtABCA1)


Aliases : ABCA1, AtABCA1

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCA transporter


Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g151400

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00136690 ATH1, ATATH1,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
AMTR_s00159p00062660 ABCA1, AtABCA1,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT2G41700 ABCA1, AtABCA1 ATP-binding cassette A1 0.02 OrthoFinder output from all 47 species
Aev_g14563 ABCA1, AtABCA1 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0022.g016230 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: CDS=354-3422 0.03 OrthoFinder output from all 47 species
Dcu_g20236 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008042001 ATH1, ATATH1, ABCA2 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01033258001 ABCA1, AtABCA1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_19049 ATH1, ATATH1, ABCA2 fatty acid transporter (ABCA). subfamily ABCA transporter 0.01 OrthoFinder output from all 47 species
Mp3g20090.1 ABCA1, AtABCA1 subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Ore_g34266 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g08285 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo424611 ABCA1, AtABCA1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc04g015970.3.1 ABCA1, AtABCA1,... subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 2095 2232
IPR003439 ABC_transporter-like_ATP-bd 911 1054
No external refs found!