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  5. Cre03.g190100

Cre03.g190100 (EIF3B-2, ATEIF3B-2, EIF3B)


Aliases : EIF3B-2, ATEIF3B-2, EIF3B

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3b component


Gene families : OG0004558 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004558_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g190100
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT5G25780 EIF3B-2, ATEIF3B-2, EIF3B eukaryotic translation initiation factor 3B-2 0.03 OrthoFinder output from all 47 species
Aop_g13421 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Azfi_s0045.g029833 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0538.g076306 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.08 OrthoFinder output from all 47 species
Cba_g02038 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Ceric.14G030700.1 EIF3B-2,... component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.60 EIF3B-2, ATEIF3B-2, EIF3B Protein biosynthesis.translation... 0.1 OrthoFinder output from all 47 species
Dcu_g11466 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.01 OrthoFinder output from all 47 species
Ehy_g04954 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01036012001 ATTIF3B1,... Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
LOC_Os10g41960.1 ATTIF3B1,... component eIF3b of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species
MA_86963g0010 EIF3B-2, ATEIF3B-2, EIF3B Eukaryotic translation initiation factor 3 subunit B... 0.01 OrthoFinder output from all 47 species
MA_86963g0020 EIF3B-2, ATEIF3B-2, EIF3B Eukaryotic translation initiation factor 3 subunit B... 0.01 OrthoFinder output from all 47 species
MA_950659g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp8g14030.1 EIF3B-2, ATEIF3B-2, EIF3B component eIF3b of eIF3 mRNA-to-PIC binding complex 0.08 OrthoFinder output from all 47 species
Nbi_g14199 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Pir_g01028 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g06442 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002800 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Sam_g10595 No alias component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Sam_g35266 No alias component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Smo446105 EIF3B-2, ATEIF3B-2, EIF3B Protein biosynthesis.translation... 0.01 OrthoFinder output from all 47 species
Solyc01g088370.3.1 EIF3B-2,... component eIF3b of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species
Spa_g08928 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Tin_g05601 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e002405_P001 ATTIF3B1,... component eIF3b of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
MF GO:0004826 phenylalanine-tRNA ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013979 TIF_beta_prop-like 411 611
IPR000504 RRM_dom 87 141
No external refs found!