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  5. Cre03.g191050

Cre03.g191050 (RAN1, RAN-1, ATRAN1)


Aliases : RAN1, RAN-1, ATRAN1

Description : Protein translocation.nucleus.nucleocytoplasmic transport.Ran GTPase


Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g191050
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT5G20020 RAN2 RAS-related GTP-binding nuclear protein 2 0.04 OrthoFinder output from all 47 species
Ala_g16549 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15514.t1 RAN1, RAN-1,... GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42654.t1 RAN3, ATRAN3,... GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0094.g043417 RAN2 GTPase *(Ran) & original description: CDS=291-938 0.04 OrthoFinder output from all 47 species
Cba_g03752 RAN2 GTPase *(Ran) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.35G063800.1 RAN3, ATRAN3,... GTPase *(Ran) & original description: pacid=50581751... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.22 RAN2 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Dac_g03631 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g31932 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01017234001 RAN2 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Gb_30495 RAN3, ATRAN3 Ran GTPase 0.02 OrthoFinder output from all 47 species
Lfl_g22288 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g19920.1 RAN2 Ran GTPase 0.04 OrthoFinder output from all 47 species
Msp_g28194 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g104700.4.1 RAN2, Solyc01g104700 Ran GTPase 0.03 OrthoFinder output from all 47 species
Solyc05g023800.3.1 RAN2, Solyc05g023800 Ran GTPase 0.02 OrthoFinder output from all 47 species
Spa_g05239 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 16 172
No external refs found!