Cre03.g207950

Description : RNA biosynthesis.RNA polymerase I-dependent transcription.TFIa/RRN3 basal transcription factor

Gene families : OG0004620 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004620_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre03.g207950
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
Cba_g12996	No alias	basal transcription factor *(TFIa/RRN3) & original...	0.02	OrthoFinder output from all 47 species
Ceric.13G084500.1	Ceric.13G084500	basal transcription factor *(TFIa/RRN3) & original...	0.03	OrthoFinder output from all 47 species
Dde_g13092	No alias	basal transcription factor *(TFIa/RRN3) & original...	0.02	OrthoFinder output from all 47 species
Mp6g17000.1	No alias	basal transcription factor (TFIa/RRN3)	0.01	OrthoFinder output from all 47 species
Ore_g07151	No alias	basal transcription factor *(TFIa/RRN3) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e013105_P001	Zm00001e013105	basal transcription factor (TFIa/RRN3)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007991	RNA_pol_I_trans_ini_fac_RRN3	10	632

External Links

No external refs found!