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  5. Cre04.g216600

Cre04.g216600 (ATSUG1, RPT6A)


Aliases : ATSUG1, RPT6A

Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component


Gene families : OG0004338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre04.g216600
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT5G19990 ATSUG1, RPT6A regulatory particle triple-A ATPase 6A 0.08 OrthoFinder output from all 47 species
AT5G20000 No alias AAA-type ATPase family protein 0.05 OrthoFinder output from all 47 species
Aev_g07060 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ala_g04855 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Als_g51835 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene40776.t1 ATSUG1, RPT6A,... regulatory component *(RPT6) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Azfi_s0290.g063325 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ceric.37G056200.1 ATSUG1, RPT6A,... regulatory component *(RPT6) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000792.28 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.15 OrthoFinder output from all 47 species
Dcu_g04554 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
GSVIVT01017222001 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.08 OrthoFinder output from all 47 species
GSVIVT01035767001 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.07 OrthoFinder output from all 47 species
Gb_08346 ATSUG1, RPT6A regulatory component RPT6 of 26S proteasome 0.06 OrthoFinder output from all 47 species
LOC_Os02g11050.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.14 OrthoFinder output from all 47 species
LOC_Os06g39870.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Len_g15696 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
MA_10427013g0010 ATSUG1, RPT6A regulatory component RPT6 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Mp1g04290.1 ATSUG1, RPT6A regulatory component RPT6 of 26S proteasome 0.15 OrthoFinder output from all 47 species
Msp_g06734 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pir_g01586 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pp3c10_2600V3.1 ATSUG1, RPT6A,... regulatory particle triple-A ATPase 6A 0.01 OrthoFinder output from all 47 species
Pp3c1_21950V3.1 ATSUG1, RPT6A,... regulatory particle triple-A ATPase 6A 0.02 OrthoFinder output from all 47 species
Sam_g13407 No alias regulatory component *(RPT6) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Smo177014 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Solyc05g018570.3.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Solyc05g018590.3.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Zm00001e014515_P001 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.12 OrthoFinder output from all 47 species
Zm00001e024980_P001 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 175 308
IPR032501 Prot_ATP_ID_OB_C 62 117
No external refs found!