Cre05.g234661

No description available

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre05.g234661
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00244830	AATP1,...	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
AT3G28600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.01	OrthoFinder output from all 47 species
AT3G28610	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.01	OrthoFinder output from all 47 species
Aob_g21682	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g08373	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.19G072100.1	Ceric.19G072100	not classified & original description: pacid=50575999...	0.02	OrthoFinder output from all 47 species
Dac_g09976	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Gb_02166	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Gb_27548	AATP1	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
LOC_Os07g09480.1	LOC_Os07g09480	AAA-ATPase At3g28610 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
MA_10430798g0010	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
MA_10430798g0020	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Pir_g04536	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017709	No alias	not classified & original description: CDS=1-1293	0.01	OrthoFinder output from all 47 species
Solyc02g062550.3.1	BCS1, Solyc02g062550	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc04g080680.4.1	BCS1, Solyc04g080680	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	HCCA
BP	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	524	569
IPR003959	ATPase_AAA_core	297	373

External Links

No external refs found!

Cre05.g234661

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation