Cre06.g248950 (UBP25)

Aliases : UBP25

Description : Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre06.g248950

Target	Alias	Description	ECC score	Gene Family Method
Aev_g21642	UBP19	regulatory deubiquitinase *(UBP15) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g27664	UBP25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g09366	UBP23	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g27096	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g13254	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000711.8	UBP25	Protein degradation.peptidase families.cysteine-type...	0.01	OrthoFinder output from all 47 species
Dac_g23037	UBP23	deubiquitinase *(UBP23) & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g26398	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Gb_05817	UBP18	deubiquitinase (UBP15-21)	0.01	OrthoFinder output from all 47 species
MA_10431488g0010	UBP23	deubiquitinase (UBP23)	0.02	OrthoFinder output from all 47 species
Mp2g05560.1	UBP18	deubiquitinase (UBP15-21)	0.01	OrthoFinder output from all 47 species
Pnu_g19055	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012859	UBP18	not classified & original description: CDS=628-2634	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012965	UBP25	component *(bL25m) of large mitoribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Solyc08g069050.3.1	UBP19, Solyc08g069050	deubiquitinase (UBP15-21)	0.04	OrthoFinder output from all 47 species
Zm00001e015501_P001	UBP21, Zm00001e015501	Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002893	Znf_MYND	92	130
IPR001394	Peptidase_C19_UCH	304	695

External Links

No external refs found!

Cre06.g248950 (UBP25)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation