No description available
Gene families : OG0004758 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004758_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre06.g259850 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00038p00170150 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.06 | OrthoFinder output from all 47 species | |
| AT5G65220 | No alias | Ribosomal L29 family protein | 0.32 | OrthoFinder output from all 47 species | |
| Aev_g03513 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g00554 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g34521 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g00731 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g32624 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.12 | OrthoFinder output from all 47 species | |
| Azfi_s0048.g030677 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.34G037300.1 | Ceric.34G037300 | component *(uL29c) of large plastid ribosomal-subunit... | 0.24 | OrthoFinder output from all 47 species | |
| Dac_g03965 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g13501 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Ehy_g20187 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g51790.1 | LOC_Os02g51790 | component psRPL29 of large ribosomal subunit proteome | 0.21 | OrthoFinder output from all 47 species | |
| Len_g04060 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g45621 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g16498 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| MA_10268152g0010 | No alias | component psRPL29 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| MA_10431457g0010 | No alias | component psRPL29 of large ribosomal subunit proteome | 0.09 | OrthoFinder output from all 47 species | |
| Mp4g10390.1 | No alias | component psRPL29 of large ribosomal subunit proteome | 0.27 | OrthoFinder output from all 47 species | |
| Msp_g08238 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g13470 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g04033 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Pp3c15_20650V3.1 | Pp3c15_20650 | Ribosomal L29 family protein | 0.11 | OrthoFinder output from all 47 species | |
| Pp3c9_19800V3.1 | Pp3c9_19800 | Ribosomal L29 family protein | 0.12 | OrthoFinder output from all 47 species | |
| Ppi_g10973 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008714 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g12929 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.12 | OrthoFinder output from all 47 species | |
| Sam_g12930 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g072470.4.1 | Solyc06g072470 | component psRPL29 of large ribosomal subunit proteome | 0.24 | OrthoFinder output from all 47 species | |
| Spa_g03535 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g13994 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Tin_g03662 | No alias | component *(uL29c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e023859_P001 | Zm00001e023859 | component psRPL29 of large ribosomal subunit proteome | 0.14 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
