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  5. Cre06.g282200

Cre06.g282200 (SNF7.2, VPS32)


Aliases : SNF7.2, VPS32

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS32/SNF7 component


Gene families : OG0001125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g282200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00189660 SNF7.1,... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 OrthoFinder output from all 47 species
Adi_g019235 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.01 OrthoFinder output from all 47 species
Adi_g019238 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.01 OrthoFinder output from all 47 species
Adi_g109176 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Aev_g09146 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Als_g37735 SNF7.1 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g02394 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014906 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g76258 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.01 OrthoFinder output from all 47 species
Ceric.32G014400.1 SNF7.1, Ceric.32G014400 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.37G059500.1 SNF7.2, VPS32,... component *(VPS32/SNF7) of ESCRT-III complex & original... 0.01 OrthoFinder output from all 47 species
Dac_g02648 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07384 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01015258001 SNF7.2, VPS32 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
GSVIVT01016913001 SNF7.1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Gb_07473 SNF7.2, VPS32 component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
LOC_Os06g40620.2 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
LOC_Os09g09480.2 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.04 OrthoFinder output from all 47 species
Len_g00301 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
MA_10435786g0010 SNF7.2, VPS32 component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
MA_62922g0010 SNF7.1 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp6g10770.1 SNF7.2, VPS32 component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Msp_g12467 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Msp_g43811 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Nbi_g27598 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Pnu_g31698 SNF7.1 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.01 OrthoFinder output from all 47 species
Ppi_g15272 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007126 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024369 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Sam_g49685 No alias component *(VPS32/SNF7) of ESCRT-III complex & original... 0.01 OrthoFinder output from all 47 species
Solyc05g026050.4.1 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Solyc08g065900.4.1 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Zm00001e024016_P002 SNF7.1, Zm00001e024016 component VPS32/SNF7 of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
Zm00001e027871_P001 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Zm00001e037444_P001 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 30 210
No external refs found!