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  5. Cre06.g308950

Cre06.g308950


No description available


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g308950
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00243500 evm_27.TU.AmTr_v1... Reticulon-like protein B6 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AMTR_s00077p00178230 evm_27.TU.AmTr_v1... Reticulon-like protein B5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT4G01230 No alias Reticulon family protein 0.01 OrthoFinder output from all 47 species
Als_g42757 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Aob_g00527 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Aop_g09568 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70929.t1 RTNLB2, BTI2,... ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Azfi_s0037.g026028 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Azfi_s0123.g048342 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Dcu_g14887 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Dcu_g38933 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Dcu_g49784 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ehy_g08969 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01005053001 RTNLB13 Reticulon-like protein B13 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os01g63240.1 LOC_Os01g63240 ER-associated protein (Reticulon) 0.01 OrthoFinder output from all 47 species
LOC_Os06g30750.1 RTNLB2, BTI2,... ER-associated protein (Reticulon) 0.01 OrthoFinder output from all 47 species
LOC_Os07g04910.1 LOC_Os07g04910 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Msp_g14633 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Nbi_g02975 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Nbi_g16540 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g66316 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Ppi_g15653 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Solyc09g055250.3.1 Solyc09g055250 ER-associated protein (Reticulon) 0.01 OrthoFinder output from all 47 species
Spa_g51559 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Spa_g56482 RTNLB3 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Zm00001e027185_P001 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.01 OrthoFinder output from all 47 species
Zm00001e038234_P001 Zm00001e038234 ER-associated protein (Reticulon) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 19 176
No external refs found!