Cre06.g310450

Description : Transcription initiation factor IIB OS=Glycine max

Gene families : OG0001894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001894_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre06.g310450
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
AT2G41630	TFIIB	transcription factor IIB	0.04	OrthoFinder output from all 47 species
Aev_g07691	No alias	basal transcription factor *(TFIIb) & original description: none	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000663.43	No alias	Transcription initiation factor IIB-2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
MA_10430001g0020	TFIIB	Transcription initiation factor IIB OS=Glycine max...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0008134	transcription factor binding	None	Extended
MF	GO:0017025	TBP-class protein binding	IEA	Interproscan
MF	GO:0140296	general transcription initiation factor binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013150	TFIIB_cyclin	109	180
IPR013137	Znf_TFIIB	6	46

External Links

No external refs found!