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  5. Cre07.g322100

Cre07.g322100


No description available


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g322100

Target Alias Description ECC score Gene Family Method Actions
Adi_g052036 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Adi_g119828 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31254 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18726 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44628.t1 RUB1, ATRUB1,... RUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08633 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15004 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Cba_g28034 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.08G062400.1 UBQ14, Ceric.08G062400 UBQ ubiquitin-fold protein & original description:... 0.02 OrthoFinder output from all 47 species
Gb_30150 RUB1, ATRUB1, NEDD8 ubiquitin-fold protein (RUB) 0.02 OrthoFinder output from all 47 species
Gb_35273 UBQ10 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
LOC_Os02g06640.1 UBQ10, LOC_Os02g06640 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
LOC_Os04g53620.1 UBQ4, LOC_Os04g53620 ubiquitin-fold protein (UBQ) 0.01 OrthoFinder output from all 47 species
MA_100402g0010 UBQ14 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
MA_10435699g0030 No alias Ubiquitin-40S ribosomal protein S27a-1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_14427g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Mp2g17420.1 UBQ10 ubiquitin-fold protein (UBQ) 0.04 OrthoFinder output from all 47 species
Mp3g22950.1 UBQ10 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Mp6g03960.1 UBQ4 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Msp_g30561 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g20581 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Ore_g41064 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g42132 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42667 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g56403 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g24678 UBQ14 UBQ ubiquiTin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027066_P001 RUB1, ATRUB1,... ubiquitin-fold protein (RUB) 0.03 OrthoFinder output from all 47 species
Zm00001e036492_P001 Zm00001e036492 Ubiquitin-40S ribosomal protein S27a OS=Solanum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR024974 Sde2_N 55 151
No external refs found!