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  5. Cre07.g325738

Cre07.g325738 (SPL7, ATSPL7)


Aliases : SPL7, ATSPL7

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g325738

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder output from all 47 species
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Adi_g015714 SPL2 SBP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g27957 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13089 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40204.t1 Aspi01Gene40204 SBP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0052.g031491 SPL15 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043231 SPL2 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0213.g058306 SPL2 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g13783 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.12G034000.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.25G025600.1 SPL3, Ceric.25G025600 SBP-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g09282 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07628 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48516 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48961 SPL8 SBP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01010496001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
LOC_Os06g49010.4 SPL2, LOC_Os06g49010 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Len_g01332 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22581 SPL3 SBP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g07869 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18170 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07077 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g30412 No alias SBP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Solyc05g015840.3.1 SPL13, SPL13A,... transcription factor (SBP) 0.01 OrthoFinder output from all 47 species
Spa_g05400 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e037693_P001 SPL8, Zm00001e037693 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 101 174
No external refs found!