Cre07.g339350

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.alpha subunit

Gene families : OG0004280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004280_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre07.g339350
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT4G24490	ATRGTA1, RGTA1	RAB geranylgeranyl transferase alpha subunit 1	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004659	prenyltransferase activity	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008318	protein prenyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
BP	GO:0018342	protein prenylation	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097354	prenylation	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002088	Prenyl_trans_a	92	118
IPR002088	Prenyl_trans_a	127	151
IPR002088	Prenyl_trans_a	162	188

External Links

No external refs found!

Cre07.g339350

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation