Aliases : SPL3
Description : RNA biosynthesis.transcriptional activation.SBP transcription factor
Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre07.g345050 | |
| Cluster | HCCA: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G53160 | SPL4 | squamosa promoter binding protein-like 4 | 0.01 | OrthoFinder output from all 47 species | |
| AT1G69170 | No alias | Squamosa promoter-binding protein-like (SBP domain)... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0212.g058167 | SPL3 | SBP-type transcription factor & original description: CDS=1-1182 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s1820.g107212 | No alias | not classified & original description: CDS=1-336 | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.22G034200.1 | SPL7, ATSPL7,... | SBP-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03947 | AtSPL9, SPL9 | SBP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19295 | SPL7, ATSPL7 | regulatory protein *(SPL7) of copper homeostasis &... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10428252g0010 | SPL8 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_10429891g0020 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g07077 | SPL7, ATSPL7 | SBP-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g30412 | No alias | SBP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013761_P001 | SPL2, Zm00001e013761 | transcription factor (SBP) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| CC | GO:0005634 | nucleus | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004333 | SBP_dom | 206 | 279 |
| No external refs found! |
