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  5. Cre08.g364550

Cre08.g364550 (UPL1)


Aliases : UPL1

Description : E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana


Gene families : OG0004358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g364550

Target Alias Description ECC score Gene Family Method Actions
Aev_g15276 UVR8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G034500.1 UVR8, Ceric.03G034500 not classified & original description: pacid=50572964... 0.01 OrthoFinder output from all 47 species
Sam_g52508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 47 111
IPR000408 Reg_chr_condens 245 295
IPR000408 Reg_chr_condens 298 347
IPR000569 HECT_dom 1174 1489
No external refs found!