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  5. Cre08.g381516

Cre08.g381516


Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum


Gene families : OG0006891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006891_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre08.g381516
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00092530 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ala_g05845 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g54425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06565.t1 Aspi01Gene06565 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001095.26 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.05 OrthoFinder output from all 47 species
Dac_g01481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_22747 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g39040.1 LOC_Os06g39040 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
Len_g12860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g27271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09599 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Solyc04g072033.1.1 Solyc04g072033 Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Tin_g02453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 41 177
No external refs found!